Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855395.1_cds_XP_016512834.1_25442
CDS Infomation

[gene=LOC107829878] [db_xref=GeneID:107829878] [protein=lysophospholipid acyltransferase LPEAT1-like isoform X2] [protein_id=XP_016512834.1] [location=complement(join(17943..17962,18330..18393,18973..19113,19650..19783,20864..20932,21688..21752,22149..22186,22334..22453,23540..24082))] [gbkey=CDS]
Sequence

ATGGAGTCCGAACTCCAAAAATTACCACCTAAAACTACCCAAACAACACAACTCGAATCC
GTGGACGAAAGTTCCCTTACCAAAGACGATCGGCCACTGCTCAAACCCGACCCGACTAAC
CCTCAACTCCAAGTTCAATCCCAGTCTTCTAGTTCTAACCCTTGCATCGAAGAATTAGAG
AAGAAATACGCCCCATATGTGAGGCATGACGTGTATGGAGTAATGGGTCGGGGCGAACTG
CCATGGACCGAGAAGGTGCTTTTGGGTATTGCGCTTGTGACGGTTGTACCTGTGAGAGTT
GTTGGGGCAATGACTGTATTGGTTGTGTATTACTTGATTTGTAAGGTTTGTACAGCGTTT
TCAGCACCGAATCGAGAGGAAGAGGAAGAGCAGGAGGATTATGCGCATATTGGTGGGTGG
AGAAGGGTTGTGATGATGCAGAGTGGGATGTTCCTTTCGAGAGTAATGCTTTTCGTTTTT
GGATTCTATTGGATTAGCGAAACTTATTGCCCCATTGATCTCAATGCCAACTCAAATAAT
GAGCATGGATCAAAAGATCAGACTGAAGAACTTGAAAGACCAGGGGCTATTGTGTCAAAT
CACATTTCGTACTTGGATATCTTGTATCACATGTCTTCCTCATTTCCTAGCTTTGTTGCT
AAGAGATCAGTGGCTAAGCTTCCTCTGGTTGGTCTCATCAGCAAGTGCCTTGGCTGTGTC
TATGTCCAGCGAGAATCGAAATCACCTGACTTTAAAGGTGTCTCAGGTGTCGTAAATGAA
AGGATTCGTGAAGCTCACCAGAACAAATCTGCACCAATCATGCTGCTTTTTCCAGAAGGC
ACAACCACAAATGGTGACTTTCTCCTTCCGTTCAAGTCTGGTGCATTTCTGTCAGGAGCT
CCGGTGCAGCCTGTGATATTAAGATATCCATACCAGAGATTAAGTCCTGCGTGGGACTCG
ATATCTGGGGTTCGGCATGTGATTCTCCTTCTCTGTCAATTTGTCAATTATGTGGAGGCA
ACCTGGTTACCTGTTTACTACCCCTCTCAGCAAGAAAAGGATGATCCTAGACTTTATGCT
GAGAATGTCCGGAGGTTGATGGCTCATGAGGGTAATTTAATACTCTCAGATATTGGCCTG
GCAGAGAAGCGAGTATATCATGCTGCTCTCAATGGTTTGTTTTGTCAACAGTAA

Peptide Sequence

PEP ID

XP_016512834.1
PEP Infomation

PREDICTED: lysophospholipid acyltransferase LPEAT1-like isoform X2 [Nicotiana tabacum]
Sequence

MESELQKLPPKTTQTTQLESVDESSLTKDDRPLLKPDPTNPQLQVQSQSSSSNPCIEELE
KKYAPYVRHDVYGVMGRGELPWTEKVLLGIALVTVVPVRVVGAMTVLVVYYLICKVCTAF
SAPNREEEEEQEDYAHIGGWRRVVMMQSGMFLSRVMLFVFGFYWISETYCPIDLNANSNN
EHGSKDQTEELERPGAIVSNHISYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCV
YVQRESKSPDFKGVSGVVNERIREAHQNKSAPIMLLFPEGTTTNGDFLLPFKSGAFLSGA
PVQPVILRYPYQRLSPAWDSISGVRHVILLLCQFVNYVEATWLPVYYPSQQEKDDPRLYA
ENVRRLMAHEGNLILSDIGLAEKRVYHAALNGLFCQQ

Transcript Sequence

Gene sequence data has not been registered.